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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933289.1_cds_XP_016479679.1_71197
CDS Infomation

[gene=LOC107800924] [db_xref=GeneID:107800924] [protein=histidine decarboxylase-like] [protein_id=XP_016479679.1] [location=complement(join(15076..15654,15751..15887,15997..16190,16648..16882,17343..17571,18039..18062))] [gbkey=CDS]
Sequence

ATGGGAAGCTTATCATTTGAGAAGGATTTTGAGCCATCAGCAGTAACTCCCAGAGGATTG
GCACCACCTGGTTTAATAGCAAATGGAGATTTTGGAGAAATGAAAAGACTAAAGGTGGCA
ACGCCAACTGCACCAAGGAAGAATTTGAATGTTGCAGTGACAGAGCCAGGGTCCAGAAAT
AACGGACCAAGTCTCGACTGCATTTTGATGAATTATATTGATACTCTTTCTCAACGTATC
AACTATCATATAGGTTATCCAGTGAACATATGCTATGAGCACTATGCTAGCTTAGCCCCA
CTATTGCAATTCCACTTGAATAATTGTGGTGATCCCTTTCTTCAAAACACAGTGGATTTC
CATTCAAAAGATTTCGAAGTGGCTGTTTTGAATTGGTTTGCAGATTTATGGGAAATTGAA
AAAGATCAATATTGGGGTTATGTTACAAATGGTGGCACTGAAGGAAATCTCCATGGCATT
TTGGTTGGGAGAGAATTACTTCCAACTGGGATCTTATATGCATCAAAAGACTCTCATTAT
TCGGTCGCCAAAGCTGCAATGATGTACAGAATGGACTTTGAAATGGTTAATACATCAGTA
CATGGAGAAATGGATTATTCAGATTTGAAAGCAAAATTACTTCAAAACAAGGGCAAACCA
GCAATAATTAATGTTACAATTGGTACTACTTTCAAAGGAGCTGTTGATGATCTTGATATT
ATTCTTCAAACACTTAAAGATTGTGGCTATACATATGATCAATTTTACATCCATTGTGAT
GCAGCACTCAATGGGCTTATTATCCCTTTTATTAAAAATATGATTTCATTCAAGAAACCA
ATTGGAAGCGTCACAATTTCTGGTCACAAGTTCTTGGGATGTCCAATGCCTTGTGGAATT
CAAATAACAAGGAAAAGTTACATTAACAACCTCTCAAGAAAAGTTGAGTATATTGCTTCA
GTAGATGCCACAATTTCTGGAAGTAGAAATGGTTTAGCTCCAATATTCCTGTGGTATAGT
TTAAGCTCTAAAGGACAAATTGGGCTTCAAAAAGACGTTAAAAGATGTCTTGACAATGCC
AAATACTTAAAAGATCGTCTTCAACAAGCAGGAGTCAGTGTCATGCTCAATGAACTTAGC
ATCATAGTTGTCCTCGAGAGACCTCGTGACCATGAATTTGTTCGTCGTTGGCAGCTTTCT
TGTGTGAGAGATATGGCACATGTTATTGTTATGCCAGGTATAACCAGAGATATCTTGGAC
AGTTTCATCAATGATTTATTGCAACAAAGGAAAAAATGGTACAAAGATGGAAATGTTACA
CCTCCTTGTGTTGCAGAAGATATTGGTGCCCAAAATTGTGCTTGCTCTTACCACAAAATT
GATTTCATTATCCCATAG

Peptide Sequence

PEP ID

XP_016479679.1
PEP Infomation

PREDICTED: histidine decarboxylase-like [Nicotiana tabacum]
Sequence

MGSLSFEKDFEPSAVTPRGLAPPGLIANGDFGEMKRLKVATPTAPRKNLNVAVTEPGSRN
NGPSLDCILMNYIDTLSQRINYHIGYPVNICYEHYASLAPLLQFHLNNCGDPFLQNTVDF
HSKDFEVAVLNWFADLWEIEKDQYWGYVTNGGTEGNLHGILVGRELLPTGILYASKDSHY
SVAKAAMMYRMDFEMVNTSVHGEMDYSDLKAKLLQNKGKPAIINVTIGTTFKGAVDDLDI
ILQTLKDCGYTYDQFYIHCDAALNGLIIPFIKNMISFKKPIGSVTISGHKFLGCPMPCGI
QITRKSYINNLSRKVEYIASVDATISGSRNGLAPIFLWYSLSSKGQIGLQKDVKRCLDNA
KYLKDRLQQAGVSVMLNELSIIVVLERPRDHEFVRRWQLSCVRDMAHVIVMPGITRDILD
SFINDLLQQRKKWYKDGNVTPPCVAEDIGAQNCACSYHKIDFIIP

Transcript Sequence

Gene sequence data has not been registered.